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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5617723_5618266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5617723 - 5618266

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTAGA

5'SS Class:

major

3'SS Sequence:

TTGTATCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TCAAACTTCACT

Flanking Amino Acid:

DISQDLDNNSKDFGQLAVEL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

72.9

38.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

82.4

0.73

0.9

73.8

41.4

Minor 5ss

33.2

-1.9

2.5

35.7

Minor BPS

50.7

0.1

70.66

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352