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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5621106_5622267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5621106 - 5622267

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATATTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTATTTTAATA

Flanking Amino Acid:

LYNNLFGPKRPKALKLLGME

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.7

0.9

78.8

38.6

Minor 5ss

36.6

-1.5

41.4

44.7

Minor BPS

67.3

0.54

1.2

70.89

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352