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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5623961_5624753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5623961 - 5624753

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TAGTGAATAATT

Flanking Amino Acid:

IPRLEELYNTRLGPPNTLHL

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

61.7

38.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

29.5

-2.3

3.2

40.9

45.3

Minor BPS

45.9

-0.2

2.2

67.32

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352