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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5629450_5632791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5629450 - 5632791

Intron Length:

3342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCTGTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGGTTTAATG

Flanking Amino Acid:

LMECMKKKELITVFRMGSEG

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.1

0.52

0.9

70.2

36.5

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

57.3

0.09

1.9

66.31

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005819

5603372 - 5638723

35352