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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5635263_5638098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5635263 - 5638098

Intron Length:

2836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTATTGACACTT

Flanking Amino Acid:

KHISLQKINTRLGQGVPVVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

89.6

0.89

0.7

87.9

29.4

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

38.5

-0.7

2.4

61.26

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352