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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5801342_5802861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5801342 - 5802861

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TAGTATAAAACT

Flanking Amino Acid:

GNCLLHAASLGMWGFHDRDL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

65.3

0.38

71.6

30.1

Major PPT

69.6

0.44

0.9

66.4

40.7

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

46.2

-0.2

66.91

43.6

Associated Gene:

Gene:

OTUD7A

Ensembl Gene ID:

ENSAPLG00000006607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006898

5787707 - 5839522

51816