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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5957729_5960109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5957729 - 5960109

Intron Length:

2381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTTG

5'SS Class:

major

3'SS Sequence:

CTTTACTAAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTCTTTACTA

Flanking Amino Acid:

EEEKFRKKQKRVDQELNGKQ

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

73.8

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.1

0.47

67.3

37.8

Minor 5ss

49.3

-0

2.5

66.4

45.1

Minor BPS

66.3

0.51

1.6

74.34

38.4

Associated Gene:

Gene:

BNIP2

Ensembl Gene ID:

ENSAPLG00000006267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006514

5957680 - 5967639

9960