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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5962842_5963555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5962842 - 5963555

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

GTCACCTTAGTC

Flanking Amino Acid:

EPYKKVISHGGYYGDGLNAI

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

57.3

0.21

1.6

63.91

41.8

Associated Gene:

Gene:

BNIP2

Ensembl Gene ID:

ENSAPLG00000006267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006514

5957680 - 5967639

9960