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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5963733_5965570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5963733 - 5965570

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGACTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CGTGTTTTGACT

Flanking Amino Acid:

SENSNEFEWEDDLPKPKTTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

72.5

0.51

1.1

69.2

41.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

58.4

0.35

1.4

70.47

41.3

Associated Gene:

Gene:

BNIP2

Ensembl Gene ID:

ENSAPLG00000006267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006514

5957680 - 5967639

9960