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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5966797_5967508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5966797 - 5967508

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTGGACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

ATTTTGTGGACT

Flanking Amino Acid:

KEEWQDEDFPRPLPEDDPVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.2

66.9

34.2

Major BPS

75.1

0.62

65.6

Major PPT

64.6

0.33

1.1

59.3

46.1

Minor 5ss

-0.9

2.4

50.3

Minor BPS

50.5

0.1

2.2

77.58

38.9

Associated Gene:

Gene:

BNIP2

Ensembl Gene ID:

ENSAPLG00000006267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006514

5957680 - 5967639

9960