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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6208756_6211656_R

Intron Information:

Intron Rank:

136138

Intron Class:

major

Intron Phase:

Intron Coordinates:

6208756 - 6211656

Intron Length:

2901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGCTATTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.5

0.75

0.8

80.5

31.5

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

58.4

0.24

1.5

62.18

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028970

6208496 - 6216508

8013