Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_6253136_6253876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6253136 - 6253876

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAGAA

5'SS Class:

major

3'SS Sequence:

GTATCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTATGATGAATG

Flanking Amino Acid:

AFAYQRRTKKVCQTPNGSPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

62.2

38.7

Major BPS

84.6

0.86

41.2

Major PPT

80.8

0.69

0.9

77.6

36.5

Minor 5ss

33.9

-1.8

3.6

46.4

48.9

Minor BPS

46.8

-0.3

2.1

58.5

Associated Gene:

Gene:

ANXA2

Ensembl Gene ID:

ENSAPLG00000006103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019999

6242191 - 6263567

21377