Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_6260021_6263507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260021 - 6263507

Intron Length:

3487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTTTCCTATTC

Flanking Amino Acid:

ILSKLSLEGDHSLPPSAYAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

65.2

0.34

0.9

57.6

33.3

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

0.2

1.9

74.44

36.6

Associated Gene:

Gene:

ANXA2

Ensembl Gene ID:

ENSAPLG00000006103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019999

6242191 - 6263567

21377

ENSAPLT00000006375

6242191 - 6263567

21377