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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6287891_6293416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6287891 - 6293416

Intron Length:

5526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGATATTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTTTTGAAAAA

Flanking Amino Acid:

MLHSACLFYIGRIDAFTSKL

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.3

0.66

0.9

72.6

41.9

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

46.6

-0.2

2.3

67.32

39.7

Associated Gene:

Gene:

ICE2

Ensembl Gene ID:

ENSAPLG00000005981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006214

6284803 - 6306853

22051