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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6797632_6797829_F

Intron Information:

Intron Rank:

151144

Intron Class:

major

Intron Phase:

Intron Coordinates:

6797632 - 6797829

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGGAAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AAACACGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

61.6

0.26

1.1

53.1

44.7

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

-0.2

2.1

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023810

6797265 - 6801001

3737