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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6857422_6857469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6857422 - 6857469

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TATTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CAAACTTTAATC

Flanking Amino Acid:

TVLVRKVGFASICSAIMEAQ

Intron Amino Acid Position:

3502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.2

57.4

41.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.1

0.81

0.8

80.1

37.1

Minor 5ss

34.6

-1.8

3.5

52.4

44.9

Minor BPS

60.9

0.32

1.3

60.94

38.5

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000005335

6857320 - 6944542

87223