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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6860791_6862071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6860791 - 6862071

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTTAGC

5'SS Class:

major

3'SS Sequence:

TTCTTCTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TTCTTCTGAACA

Flanking Amino Acid:

GRRANLIVTNRRVIYVKEVE

Intron Amino Acid Position:

3453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

70.7

39.5

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

75.7

0.58

73.1

36.1

Minor 5ss

42.2

-0.9

2.5

42.2

Minor BPS

72.9

0.72

1.4

79.77

36.3

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223