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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6860826_6862094_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6860826 - 6862094

Intron Length:

1269

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAACCTT

5'SS Class:

major

3'SS Sequence:

TAATCCCAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCATTTCATT

Flanking Amino Acid:

YHCALPRGRRKLCIDFCFLL

Intron Amino Acid Position:

3466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.3

66.5

44.3

Major BPS

100

1.24

0.5

100

Major PPT

49.4

-0

1.2

50.4

38.1

Minor 5ss

32.4

-2

4.3

47.6

47.9

Minor BPS

53.6

0.19

1.9

78.07

38.6

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223