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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6869946_6870377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6869946 - 6870377

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGAATT

5'SS Class:

major

3'SS Sequence:

TTCTTTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

AGGAACTTAATT

Flanking Amino Acid:

LAKGGKGLLRGVVGGVTGII

Intron Amino Acid Position:

3328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

77.2

37.7

Major BPS

76.9

0.67

66.3

40.4

Major PPT

78.6

0.64

0.8

72.7

37.5

Minor 5ss

45.1

-0.5

2.9

58.4

45.9

Minor BPS

58.2

0.33

1.6

69.26

41.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276