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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6870542_6871139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6870542 - 6871139

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTGT

5'SS Class:

major

3'SS Sequence:

TCTGTTCCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTAAATTTATTT

Flanking Amino Acid:

GVRSLLGHTVGGAAGVVSRI

Intron Amino Acid Position:

3273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.4

41.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

69.9

0.45

0.9

63.7

38.1

Minor 5ss

47.6

-0.2

2.5

58.3

46.4

Minor BPS

49.9

0.07

1.8

70.47

40.6

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223