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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6873189_6873967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6873189 - 6873967

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATGTAT

5'SS Class:

major

3'SS Sequence:

TGTATTAAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTTTCTGTATT

Flanking Amino Acid:

STDPEAERQRSKLIQQDIDA

Intron Amino Acid Position:

3099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.5

38.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

64.8

0.33

1.1

Minor 5ss

-1.4

3.3

47.2

48.3

Minor BPS

62.2

0.46

1.8

84.17

36.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276