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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6876107_6876642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6876107 - 6876642

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGATAATTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTGATAATT

Flanking Amino Acid:

GWQKLDNNTEVNFSKVPMEM

Intron Amino Acid Position:

2964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

64.9

0.34

1.1

56.3

47.3

Minor 5ss

2.8

73.4

43.4

Minor BPS

49.4

0.04

2.2

77.83

38.8

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223