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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6876794_6877123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6876794 - 6877123

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACTGCAT

5'SS Class:

major

3'SS Sequence:

GTATTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTACTTTTAAAT

Flanking Amino Acid:

KKEISYIGITSSGVVWEQKL

Intron Amino Acid Position:

2913

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.6

43.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.1

0.68

0.9

74.1

36.4

Minor 5ss

31.4

-2.1

3.6

47.4

Minor BPS

60.3

0.4

1.4

72.2

38.1

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223