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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6877360_6878532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6877360 - 6878532

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCAATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTTTTCCAATA

Flanking Amino Acid:

QNFGEHDLLKDECGQFPYNA

Intron Amino Acid Position:

2835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

71.4

0.53

67.3

39.3

Major PPT

0.67

0.9

74.5

34.1

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

53.2

0.1

1.8

71.6

34.7

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223