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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6881812_6882551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6881812 - 6882551

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATGTTAATT

Flanking Amino Acid:

KCSANNMDYLVGVSIKMSSF

Intron Amino Acid Position:

2650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

73.9

0.54

0.9

69.1

35.8

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

55.4

0.25

2.1

75.63

41.8

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223