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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6882657_6883532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6882657 - 6883532

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TTTTTTTTGTCT

Flanking Amino Acid:

KKKNIFSKNKIQLRISTSAW

Intron Amino Acid Position:

2615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

77.5

33.3

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

77.9

0.63

72.9

42.2

Minor 5ss

46.4

-0.4

3.1

63.9

47.7

Minor BPS

48.7

-0

3.5

85.97

34.5

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223