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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6885572_6885837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6885572 - 6885837

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTATAT

U12 Branch Point Sequence:

TTGTGTGTACCT

Flanking Amino Acid:

EEFHVPLHSYRCHLYVRPTG

Intron Amino Acid Position:

2386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

55.3

0.13

1.2

52.8

42.9

Major PPT

76.7

0.6

0.8

73.2

31.7

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

44.8

-0.3

2.5

70.68

46.8

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223