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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6886625_6886747_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6886625 - 6886747

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAATTTGA

5'SS Class:

major

3'SS Sequence:

TTAGAACTTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGGATT

Flanking Amino Acid:

KCHLKLVLPEGYNEVVNIPI

Intron Amino Acid Position:

2192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

58.8

45.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.8

0.2

1.2

54.1

44.8

Minor 5ss

28.9

-2.4

3.8

32.3

42.2

Minor BPS

56.2

0.28

1.8

80.46

35.1

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276