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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6886625_6887439_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6886625 - 6887439

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

TTAGAACTTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGGATT

Flanking Amino Acid:

QESSIFSLNLGYNEVVNIPI

Intron Amino Acid Position:

2315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.8

0.2

1.2

54.1

44.8

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

56.2

0.28

1.8

80.46

35.1

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223