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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6895999_6896834_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6895999 - 6896834

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

GCTTTTGGACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATCAACA

Flanking Amino Acid:

KVSNESDSSEESVSTVESSA

Intron Amino Acid Position:

1715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

72.9

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

53.3

0.07

1.2

45.1

Minor 5ss

45.2

-0.5

2.5

48.8

47.3

Minor BPS

64.9

0.46

1.8

80.76

34.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000005335

6857320 - 6944542

87223