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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6896992_6898191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6896992 - 6898191

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCACTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TGTCACTTTACA

Flanking Amino Acid:

GVKGDLKPMQIALSEDDLTV

Intron Amino Acid Position:

1663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.3

31.6

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

79.8

0.67

0.9

72.5

37.4

Minor 5ss

38.3

-1.3

49.1

46.6

Minor BPS

57.4

0.22

1.9

71.38

39.6

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223