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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6899040_6899525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6899040 - 6899525

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TACTTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATCTTTTTGACT

Flanking Amino Acid:

YLHKFFMSLLNFLNNFQTAQ

Intron Amino Acid Position:

1509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

74.6

0.55

0.9

70.3

34.8

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

70.4

0.72

1.1

80.24

35.9

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223