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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6909147_6909424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6909147 - 6909424

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AATATATTATTT

Flanking Amino Acid:

DVDSRTLHKKAVSIVADEVF

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.1

62.9

38.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

0.83

0.6

80.7

31.3

Minor 5ss

40.3

-1.1

3.6

54.3

Minor BPS

47.6

-0.1

1.8

65.31

39.1

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223