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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6909529_6910515_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6909529 - 6910515

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAAAT

5'SS Class:

major

3'SS Sequence:

TTATACTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCTTATACT

Flanking Amino Acid:

KKNIAEIKIQGLDSSLLLQP

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

75.3

33.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.1

0.74

0.9

76.8

36.9

Minor 5ss

41.3

-1

2.9

57.7

46.5

Minor BPS

64.5

0.54

87.77

37.8

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223