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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6910626_6911692_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6910626 - 6911692

Intron Length:

1067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTTTGTCAG

5'SS Class:

weak_major

3'SS Sequence:

TTTTAGTGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCTGTCTTATTT

Flanking Amino Acid:

DDNRLKKGIFVPSKDKDIFA

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.3

46.5

43.1

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

69.4

0.44

1.1

62.9

Minor 5ss

-1.4

2.7

43.1

43.9

Minor BPS

58.9

0.36

1.7

74.56

43.3

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000005335

6857320 - 6944542

87223