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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6910702_6913848_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6910702 - 6913848

Intron Length:

3147

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTTGGACC

5'SS Class:

major

3'SS Sequence:

AACAGCCGTCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

AGTAACTAAACT

Flanking Amino Acid:

LHLISSSDKPVLSGDKDIFA

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.3

62.7

40.6

Major BPS

68.7

0.47

0.9

67.9

Major PPT

55.3

0.12

1.1

43.5

42.4

Minor 5ss

25.8

-2.8

3.8

33.3

35.5

Minor BPS

53.7

0.19

1.9

73.4

42.7

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000034428

6857320 - 6944542

87223