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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6911857_6913816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6911857 - 6913816

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGATA

5'SS Class:

major

3'SS Sequence:

ATGTTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATGTTTTGAACA

Flanking Amino Acid:

LDLLKVEYIKVAFSSLNILL

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

73.8

36.4

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

69.5

0.44

1.1

66.1

43.7

Minor 5ss

41.3

-1

3.2

56.7

47.6

Minor BPS

63.3

0.41

1.4

69.95

36.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000005335

6857320 - 6944542

87223