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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6913894_6914295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6913894 - 6914295

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TGTTATGTTACA

Flanking Amino Acid:

TISLDYYEIGGKKAPLHLIS

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

70.4

0.51

67.1

39.4

Major PPT

79.3

0.66

72.4

42.2

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

45.5

-0.3

2.4

64.8

41.3

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223