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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6915118_6916467_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6915118 - 6916467

Intron Length:

1350

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCTAACTAC

5'SS Class:

weak_major

3'SS Sequence:

CTTCACTAAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TTATCCTTCACT

Flanking Amino Acid:

TSMPIASTKVRGHFCSVDSE

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.4

48.4

37.2

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

0.14

1.1

57.8

36.3

Minor 5ss

31.2

-2.1

42.4

Minor BPS

78.4

0.98

1.7

93.01

35.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005335

6857320 - 6944542

87223