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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6915121_6916479_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6915121 - 6916479

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCACAAAGG

5'SS Class:

weak_major

3'SS Sequence:

ATCCTTCACTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TTATCCTTCACT

Flanking Amino Acid:

LPQKTSMPIAKGGHFCSVDS

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.3

52.8

43.6

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

60.4

0.24

1.1

64.6

35.2

Minor 5ss

22.5

-3.2

3.9

30.4

36.9

Minor BPS

78.4

0.98

1.7

93.01

35.4

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223