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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6919191_6919348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6919191 - 6919348

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

CCTTTCTGAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CCTTTCTGAAAA

Flanking Amino Acid:

SQPVEIKYDARTINAMVEFF

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

71.9

39.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

60.8

0.24

1.1

63.5

36.1

Minor 5ss

34.2

-1.8

2.9

41.7

Minor BPS

57.2

0.22

1.6

64.83

41.6

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276