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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6925228_6925915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6925228 - 6925915

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

GGAATTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTGCTCACAAGT

Flanking Amino Acid:

NVSVHKNARQWWKYAGDSVL

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.7

40.2

Major BPS

58.9

0.22

49.8

35.1

Major PPT

61.7

0.26

1.1

54.4

45.5

Minor 5ss

43.4

-0.7

2.9

Minor BPS

45.2

-0.2

66.28

44.1

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034428

6857320 - 6944542

87223

ENSAPLT00000034128

6860267 - 6944542

84276

ENSAPLT00000005335

6857320 - 6944542

87223

ENSAPLT00000047562

6857320 - 6944542

87223