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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6926819_6932123_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6926819 - 6932123

Intron Length:

5305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTTATAAAG

5'SS Class:

weak_major

3'SS Sequence:

TTGAATTCTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATAATTTGAATT

Flanking Amino Acid:

FITLTFLKVCIFRPVSASAR

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.2

38.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

65.8

0.36

1.1

68.6

Minor 5ss

31.1

-2.2

2.7

35.3

35.2

Minor BPS

54.1

0.21

1.4

68.46

36.3

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047562

6857320 - 6944542

87223