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Intron Name: Anas_platyrhynchos_platyrhynchos_11_6931532_6933667_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6931532 - 6933667

Intron Length:

2136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCAGTCA

5'SS Class:

weak_major

3'SS Sequence:

TACCCCTACGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTTTTACCC

Flanking Amino Acid:

VLLSVLNSTKLLCLDSLSAY

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.1

52.6

34.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

63.2

0.3

0.9

58.4

31.5

Minor 5ss

31.6

-2.1

3.5

37.8

45.1

Minor BPS

0.64

1.5

81.25

33.5

Associated Gene:

Gene:

VPS13C

Ensembl Gene ID:

ENSAPLG00000004988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005335

6857320 - 6944542

87223