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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7087407_7088520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7087407 - 7088520

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TTACTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

CTTTGCTTACTT

Flanking Amino Acid:

PVQLNLLYVQARDDILNGSH

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

85.8

0.8

80.3

31.5

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

58.4

0.34

2.1

79.08

43.9

Associated Gene:

Gene:

TLN2

Ensembl Gene ID:

ENSAPLG00000004060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004420

7081433 - 7182577

101145