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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7143549_7144628_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7143549 - 7144628

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTCA

5'SS Class:

major

3'SS Sequence:

CTCTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGATTTTTATCT

Flanking Amino Acid:

AAKEGGGNPKASHTHDAITE

Intron Amino Acid Position:

1786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

64.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.3

0.79

0.8

83.6

31.4

Minor 5ss

42.5

-0.8

3.1

56.5

47.9

Minor BPS

62.8

0.48

1.6

76.96

39.7

Associated Gene:

Gene:

TLN2

Ensembl Gene ID:

ENSAPLG00000004060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036381

7119944 - 7182577

62634

ENSAPLT00000004420

7081433 - 7182577

101145