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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7165075_7167435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7165075 - 7167435

Intron Length:

2361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTCTGTTAATT

Flanking Amino Acid:

ELIQSAEAMKGTEWVDPEDP

Intron Amino Acid Position:

2289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

84.4

0.85

34.5

Major PPT

77.9

0.63

0.9

74.6

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

57.1

0.3

2.1

76.4

40.9

Associated Gene:

Gene:

TLN2

Ensembl Gene ID:

ENSAPLG00000004060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036381

7119944 - 7182577

62634

ENSAPLT00000004420

7081433 - 7182577

101145