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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7173732_7176898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7173732 - 7176898

Intron Length:

3167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CATCTCTGAACT

Flanking Amino Acid:

AQRELVAQGKVGAIPANAAD

Intron Amino Acid Position:

2373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

79.3

31.1

Major BPS

69.8

0.49

37.5

Major PPT

83.5

0.75

0.8

80.8

36.2

Minor 5ss

28.2

-2.5

2.8

32.2

42.5

Minor BPS

62.8

0.48

1.5

75.43

40.8

Associated Gene:

Gene:

TLN2

Ensembl Gene ID:

ENSAPLG00000004060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036381

7119944 - 7182577

62634

ENSAPLT00000004420

7081433 - 7182577

101145