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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7300609_7300735_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7300609 - 7300735

Intron Length:
127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCC|GTGAGTGGC

5'SS Class:
major

3'SS Sequence:
TTGCCCTCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTGAC

U12 Branch Point Sequence:
CTGCCCTTGCCC

Flanking Amino Acid:
MPLAKDLVHPSL

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.9
0.33
1.3
57.9
41.8

Major BPS
63.7
0.34
1.2
57
41.8

Major PPT
75
0.56
0.8
69.5
31.1

Minor 5ss
29.5
-2.4
3.1
39
39.8

Minor BPS
43.8
-0.5
3.5
62.93
43.1

Associated Gene:

Gene:
RPS27L

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7297677 - 7300741
3065