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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7354779_7355620_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7354779 - 7355620

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGTTCAC

5'SS Class:

weak_major

3'SS Sequence:

ATAACTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

AACTTCATAACT

Flanking Amino Acid:

HYKNMGIPFSSPDLYFINHS

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.2

49.4

41.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

69.6

0.44

62.2

43.4

Minor 5ss

36.1

-1.6

3.3

53.6

43.7

Minor BPS

0.49

1.6

76.29

Associated Gene:

Gene:

CA12

Ensembl Gene ID:

ENSAPLG00000003479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034412

7354672 - 7366146

11475